[gmx-users] g_tune_pme error in blue gene

Albert mailmd2011 at gmail.com
Sat Mar 31 20:50:53 CEST 2012


Hello:

   I am trying to run g_tune_pme in blue gene with following script:

# @ job_name = bm
# @ class = kdm-large
# @ account_no = G07-13
# @ error = gromacs.info
# @ output = gromacs.out
# @ environment = COPY_ALL
# @ wall_clock_limit = 160:00:00
# @ notification = error
# @ job_type = bluegene
# @ bg_size = 64
# @ queue
mpirun -exe /opt/gromacs/4.5.5/bin/g_tune_pme -args "-v -s md.tpr -o 
bm.trr -cpo bm.cpt -g bm.log -launch" -mode VN -np 256

but I've got the following messages as soon as I submit jobs and it 
terminate soon:

---gromacs.info--------------
<Mar 31 20:45:57.677742> BE_MPI (ERROR): Job execution failed
<Mar 31 20:45:57.677803> BE_MPI (ERROR): Job 10969 is in state ERROR ('E')
<Mar 31 20:44:58.476985> FE_MPI (ERROR): Job execution failed (error 
code - 50)
<Mar 31 20:44:58.477065> FE_MPI (ERROR):  - Job execution failed - job 
switched to an error state
<Mar 31 20:45:57.714358> BE_MPI (ERROR): The error message in the job 
record is as follows:
<Mar 31 20:45:57.714376> BE_MPI (ERROR):   "Load failed on 
192.168.101.49: Executable file is not a 32-bit ELF file"
<Mar 31 20:44:58.691897> FE_MPI (ERROR): Failure list:
<Mar 31 20:44:58.691923> FE_MPI (ERROR):   - 1. Job execution failed - 
job switched to an error state (failure #50)


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