[gmx-users] trjconv -seq does not work?

[Justin Lemkul]

On 11/22/12 9:14 PM, Yun Shi wrote:
> Hi everyone,
>
> I thought this might have been discussed before, but a search did not
> give me any information. So I was trying to convert a .txc trajectory
> into separate PDB files. But when I issued the command with -seq, I
> got:
>
> -------------------------------------------------------
> Program trjconv, VERSION 4.5.4
> Source code file: statutil.c, line: 819
>
> Invalid command line argument:
> -seq
> For more information and tips for troubleshooting, please check the GROMACS
> website at http://www.gromacs.org/Documentation/Errors
> -------------------------------------------------------
>
> Then I tried "-seq yes", which resulted in the same error. So it is
> with "-noseq".
>
> Please let me know if anyone has any advice.
>

The option is -sep (i.e., separate), not -seq.

-Justin

-- 
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================