[gmx-users] protein peptide interaction -reg

venkatesh s svenkateshbioinformatics at gmail.com
Mon Oct 1 14:52:10 CEST 2012

Respected Gromacs Users,
                                 i am trying to simulate protein peptide
want understand interaction
my protien 210 Amino acid and my peptide only 5 Amino acid, and molecular
types different (between protein peptide )

docked conformation  (may i follow Protein ligand tutorial )

inserting peptide into pdb file
which suitable way i want do in gromacs ?

kindly provide suggestion
Thanking You

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