[gmx-users] How to have two proteins randomly positioned and oriented in the box

Zhikun Cai caizkun at gmail.com
Mon Apr 1 03:51:30 CEST 2013


Hi everyone,

I am trying to insert two same proteins in a simulation box. Now I have
used pdb2gmx to convert one protein's pdb file to gro file. Then how should
I do? How could they be randomly positioned and oriented in the box?
Thanks in advance.

Zhikun



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