[gmx-users] Re: g_density: Segmentation fault

Dr. Vitaly Chaban vvchaban at gmail.com
Tue Apr 2 22:03:13 CEST 2013

> >
> > Do I have to read less frames to circumvent the problem? I know g_density
> > has been used for this purpose so there should be a way to resolve this.
> I
> > am reading 1000 frames...
> >
> >
> 1000 frames shouldn't be a problem, but it's an easy test to do.

Sometimes this happens with gromacs analysis utilities if the trajectory is
not finished yet (mdrun runs in the same folder and appends the XTC or EDR
file) or if certain frame has not been correctly written down.

Dr. Vitaly Chaban

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