[gmx-users] About Free energy surface .....g_sas

[rama david]

Dear Friends,
  I simulated the 4 peptide in water box .
As they come close to each other they start to from anti-parallel
beta sheet structure.



Now I want to draw the Free energy surface for the
same ..How is  there pot energy ???

Would you please tell me how to do it ..

( I read about g_sham -h, I tried it, but not understand properly)

I will be very grateful for your suggestion and help..




With Best Wishes,
Rama David