[gmx-users] Intel compiling failed

Albert mailmd2011 at gmail.com
Fri Apr 5 12:25:35 CEST 2013


  I am trying to compile gromacs with intel compiler. However, it failed 
when I compile FFTW3 with command:

./configure --enable-sse --enable-float --with-pic --enable-single 
--enable-static --enable-mpi --prefix=/home/albert/install/fftw-3.3.3 
CC=icc CXX=icc F77=ifort

here is the log file:

mp.c:(.text+0x3148): undefined reference to `_intel_fast_memset'
../libbench2/libbench2.a(mp.o):mp.c:(.text+0x3488): more undefined 
references to `_intel_fast_memset' follow
collect2: ld returned 1 exit status
make[3]: *** [mpi-bench] Error 1
make[3]: Leaving directory `/home/albert/install/00-source/fftw-3.3.3/mpi'
make[2]: *** [all] Error 2
make[2]: Leaving directory `/home/albert/install/00-source/fftw-3.3.3/mpi'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/albert/install/00-source/fftw-3.3.3'

make: *** [all] Error 2

thank you very much

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