[gmx-users] amber99 with berger's lipids

Justin Lemkul jalemkul at vt.edu
Sat Apr 6 17:03:23 CEST 2013

On Sat, Apr 6, 2013 at 10:46 AM, Albert <mailmd2011 at gmail.com> wrote:

> On 04/06/2013 04:29 PM, Justin Lemkul wrote:
>> And what was your basis for that decision?  What makes you think that
>> AMBER99 can even be combined with the Berger lipid force field?
>> -Justin
> I think he probably read this paper which suggest the combination of Amber
> FF and Berger lipids FF:
> http://pubs.acs.org/doi/abs/**10.1021/ct200491c<http://pubs.acs.org/doi/abs/10.1021/ct200491c>

Fair enough. I wasn't aware of that one. But if that's the case, then I
suggest James have another read through it, since the cutoffs are described
explicitly, thus answering his original question.




Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540)


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