[gmx-users] why minimization stop so fast

[Justin Lemkul]

On 4/16/13 1:31 PM, Albert wrote:
> On 04/16/2013 07:28 PM, Justin Lemkul wrote:
>> Create a more physically reasonable starting structure.
>>
>> -Justin
>
>
> the protein and ligand are already minimized, but CHARMM-GUI create the mix
> lipids automatically which I cannot change them.....
>

Then you will have to find a better method for creating the membrane or 
otherwise determine how you might modify then one with which you've been provided.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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