[gmx-users] Error in make install "no valid ELF RPATH". Cray XE6m

Daniel Adriano Silva M dadriano at gmail.com
Sat Apr 20 03:04:15 CEST 2013

Dear Gromacs users&devs,

I just installed gromacs-4.5.7 in a Cray XE6m, the serial installation
went fine, however the mpi installation presents a problem. It
compiles fine, but the "make install" (or make install-mdrun) seems to
have problems copying the executable files to the installation

If I run the executable from the compilation directory (for instance:
gromacs-4.5.7/build_mpi/src/kernel/mdrun_mpi), everything seems fine.

My command(s):

cmake ../ -DCMAKE_INSTALL_PREFIX=$HOME/PROGRAMS/gromacs-4.5.7-icc-fftw-mpi
-DGMX_MPI=ON -DMPI_INCLUDE_PATH="/opt/cray/mpt/5.5.4/gni/mpich2-intel/120/include/"


CMake Error at src/kernel/cmake_install.cmake:65 (FILE):
  file RPATH_CHANGE could not write new RPATH:


  to the file:


  No valid ELF RPATH or RUNPATH entry exists in the file;
Call Stack (most recent call first):
  src/cmake_install.cmake:39 (INCLUDE)
  cmake_install.cmake:40 (INCLUDE)

make: *** [install] Error 1

Any help will be appreciated,

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