[gmx-users] keeping the position and coordinates at the same when extarct frames

Justin Lemkul jalemkul at vt.edu
Sun Apr 21 15:07:28 CEST 2013

On 4/21/13 9:05 AM, aixintiankong wrote:
> Dear,
>     After extracting the frames of  the steep 20th pdb file and 993th pdb file from the MD, i found the position of the two frames are very diffrent in pymol and vmd. why? could i exracting pdb file form  different steeps and keep them in align?  please help me .

As with your previous post, the solution can be found in trjconv -h.



Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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