[gmx-users] system explode when running in MD production

[Justin Lemkul]

On 4/21/13 8:01 PM, Nur Syafiqah Abdul Ghani wrote:
> HI guys,
>
> I got this problem when I running my protein and metal in mix solvent condition.
>

Please see the standard advice:

http://www.gromacs.org/Documentation/Terminology/Blowing_Up

Without significantly more detail (your preparation protocol, EM, equilibration, 
topology information, .mdp files, etc) then no one stands any chance of being 
able to help you.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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