[gmx-users] xpm2ps issue

Justin Lemkul jalemkul at vt.edu
Fri Apr 26 12:48:48 CEST 2013

On 4/26/13 4:33 AM, Neha Gandhi wrote:
> Dear Gromacs Users and Developers,
> I am doing do_dssp analyses using a trajectory and structure file both in
> pdb format.
> My trajectory is 1 microseconds (with snapshots saved every 10 ps), xpm2ps
> doesn't show ticks on X-axis. I get following message:
> Auto-tick spacing failed for X-axis, guessing 10009.
> Upon do_dssp analyses only on 300 frames, ticks on both Y and X-axis are
> visible. How can one play around with scales on X-axis? I tried tweaking
> -bx and -size parameters but didn't help.
> Any feedback is appreciated.

Specify spacing and other matrix properties using an .m2p file passed to the -di 



Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


More information about the gromacs.org_gmx-users mailing list