[gmx-users] Lateral Diffusion of Lipids

[Justin Lemkul]

On 8/11/13 11:26 PM, Kieu Thu Nguyen wrote:
> Dear users,
>
> I want to use g_msd to measure diffusion coefficients of lipid bilayer. But
> i do not know how to choose the reference atom per lipid for an any type of
> lipid, such as POPC, DOPC,...
> Where i can get these references ?
>

Most people choose the phosphorus atom as the reference atom.

-Justin

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Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441

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