[gmx-users] velocity generation

kiana moghaddam ki_moghaddam at yahoo.com
Thu Dec 5 18:42:11 CET 2013

Dear GMX user 

I want to use NVT to heat my system (DNA-ligand) from 0 to 300K then NPT at 300 K in equilibration step.
I 'm very confused about velocity generation.
I use gen_vel= no in the first step (NVT) then generate velocity in the NPT step at 300 K. After that, in production step I use gen_vel= no. Is my process correct?

Thank you
Best Regards

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