[gmx-users] g_membed deprecated?

Albert mailmd2011 at gmail.com
Wed Feb 6 18:01:34 CET 2013


On 02/06/2013 05:37 PM, Namita Dube wrote:
> Hi,
> There must be some kind of problem with your system.
> have you tried using :
> mdrun -s input.tpr -membed membed.dat -o traj.trr -c membed.pdb -e ener.edr
> -nt 1 -cpt -1 -mn index.ndx -mp merged.top -v -stepout 100
> what it says?
>
> Thanks.


it stopped with errors.

not eough space for XTC?



However, when I run it in gromacs-4.5.6 by g_membed, it finished well.

best
Albert



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