[gmx-users] Questions about parameters in topology file
Ali Alizadeh
ali.alizadehmojarad at gmail.com
Sat Feb 9 09:14:18 CET 2013
Dear All user
I am using oplsa.ff( in forcefield.itp : oplsa use combination rule 3
, A part of my topology file,
Can I use my parameters instead of force filed parameters in my
topology file?, for example:
A part of my topology file,
---------------------------------
.
.
.
.
[ pairs ]
; ai aj funct V(sigma) W(e)
1 4 1 0.3905 0.7330109793
1 9 1 0.3905 0.6017887953
2 5 1 0.3905 0.7330109793
2 10 1 0.3905 0.7330109793
3 6 1 0.3905 0.7330109793
3 8 1 0.3905 0.7330109793
4 7 1 0.3905 0.6017887953
9 7 1 0.3905 0.494012928
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Sincerely
Ali Alizadeh
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