[gmx-users] Stopping protein jumping inside box

[Naga Sundar]

Hi
     Plz try  -pbc nojump option...It may work

On Wed, Feb 13, 2013 at 5:29 AM, 라지브간디 <rajiv at kaist.ac.kr> wrote:

> Dear gmx users,
>
>
> I need to stop my protein jumping inside box. I have used  -pbc mol -ur
> compact -center  command too but still the protein gets moving from one
> place to other.
>
>
> Could you please suggest me how to make the protein to stop in one place ?
> Moreover, its protein with their ligand.
>
>
>
>
> Thnx.
>
>
>
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-- 
Regards
N.NagaSundaram