[gmx-users] Implicit solvent

Алексей Раевский rayevsky85 at gmail.com
Thu Feb 14 07:01:23 CET 2013

Hi, dear developers!

I want to ask you abou dynamics in implicit solvent. I have a complex of
animal protein - dimer/trimer. After modeling by homology I have built
another one from the plant organism. Dimer/trimer was constructed with
superposition method. The question is - can I use imlicit solvent model to
optimize and relax this complex? Is it real and where I can find suitable
parameters of mdp?

Thank you


Nemo me impune lacessit*

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