[gmx-users] I can't figure out what is wrong with my .gro

Justin Lemkul jalemkul at vt.edu
Thu Jan 10 01:51:50 CET 2013

On 1/9/13 7:49 PM, Xu Dong Huang wrote:
> @Justin,
> I did what you suggested, and I still can't load my molecule in VMD. Maybe I am still doing something wrong with the new line character thing.

Go to the last line and go to the end of it.  Hit enter.  Hit backspace (brings 
you back up to the vectors line and removes the blank line).  Save the file. 
That's all I did.  If you run 'wc -l star.gro' you should get 104 in the 
terminal instead of 103.



Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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