[gmx-users] g_bundle: angle with x or y axis.

rajat desikan rajatdesikan at gmail.com
Sat Jan 19 15:02:12 CET 2013

Why don't you try rotating your simulation box using editconf (.gro) or
trjconv (.xtc)

On Sat, Jan 19, 2013 at 5:39 AM, Mortuza Munna <mortuza862 at yahoo.com> wrote:

> Dear gromacs user,
> I have found that g_bundle can measure the angle between a group from
> index file and z-axis with the option -z. Is it possible to measure the
> angle of that group from index file with y-axis/x-axis? Any suggestion will
> be appreciable.
> Regards,
> Mortuza
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Rajat Desikan (Ph.D Scholar)
Prof. K. Ganapathy Ayappa's Lab (no 13),
Dept. of Chemical Engineering,
Indian Institute of Science, Bangalore

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