[gmx-users] clusterization in dihedral space

[francesco oteri]

Thank you Mark and Justin,
do you have any reference where this kind of clustering is explained?

I mean, since i need a parameter representing the difference between two
frames
to build the matrix, what is the parameter I can use starting from the
dihedrals?

Francesco



2013/1/22 Mark Abraham <mark.j.abraham at gmail.com>

> On Mon, Jan 21, 2013 at 8:06 PM, francesco oteri
> <francesco.oteri at gmail.com>wrote:
>
> > Thank you,
> > but I don't see how performing cluster analysis with g_angle
> >
>
> g_dih never did do any clustering. As Justin said, g_angle with a suitable
> index group likely does the job for you.
>
> Mark
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-- 
Cordiali saluti, Dr.Oteri Francesco