[gmx-users] make_ndx error

[Justin Lemkul]

On 1/26/13 1:30 PM, Albert wrote:
> On 01/26/2013 06:53 PM, Justin Lemkul wrote:
>>
>> What exactly did you enter at the make_ndx prompt?
>>
>> -Justin
>
> 1|25
>
> protein, water and ions....
>
>

What types of ions do you have?  I can reproduce this problem for a protein with 
ions bound to it, which are numbered discontinuously with water and ions in 
solution.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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