[gmx-users] bad box error

[Justin Lemkul]

On 1/29/13 2:43 PM, az kalsom wrote:
> hi ,
>
> when i use "editconf" to generate a dodecahedron box with the command
>
> editconf -f conf.gro -o newbox.gro -bt dodecahedron -d 1.0
>
> the output shows the warning
>
> bad box in file
>
> generated  a new cubic box  9.213 x    2.495 x    2.960
>
>
> what is the mean of "bad box in file"?
>   and why editconf generates a cubic box?
>

Whatever input you have provided is malformatted.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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