[gmx-users] How to make changes on Trajectory file?

Justin Lemkul jalemkul at vt.edu
Mon Jul 15 18:11:02 CEST 2013



On 7/15/13 12:08 PM, Rama wrote:
>
> Hi,
>
> I saved my coordinates every 500ps in production MD run, could I alter now
> .xtc file by saving different coordinates for ex: every 100ps. Is there any
> command to alter the files.
>

You can't create frames that aren't there.  You can decrease the frame interval 
using trjconv -skip, but you can't perform magic the other way around.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
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Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441

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