[gmx-users] Compilation problem with Gromacs 4.5.7 (autoconf only)

Luís Pereira luisp2005 at gmail.com
Mon Jul 22 12:35:24 CEST 2013


I've got the same error.
Uninstall automake 1.11 and install automake 1.10
For me it solved the problem.

Luís


On 20 July 2013 12:42, Suman Chakrabarty <suman at sscu.iisc.ernet.in> wrote:

> Hello,
>
> I am not sure whether this is a known problem, but it seems
> gromacs-4.5.7 compilation using autoconf tool is still broken (at
> least for me). The ./configure step completes without any error. But
> "make" fails with the following error regarding not finding certain
> version of aclocal and automake (I have aclocal-1.11 and automake-1.11
> installed. Is there any new strict version requirement in 4.5.7?). By
> the way, compilation of 4.5.6 completes successfully using autoconf
> tool, and 4.5.7 works with cmake compilation.
>
> The error at the "make" step:
>
> cd . && /bin/bash /home/suman/sources/gromacs-4.5.7/config/missing
> --run aclocal-1.10 -I config
> /home/suman/sources/gromacs-4.5.7/config/missing: line 52:
> aclocal-1.10: command not found
> WARNING: `aclocal-1.10' is missing on your system.  You should only need
> it if
>          you modified `acinclude.m4' or `configure.ac'.  You might want
>          to install the `Automake' and `Perl' packages.  Grab them from
>          any GNU archive site.
>  cd . && /bin/bash /home/suman/sources/gromacs-4.5.7/config/missing
> --run automake-1.10 --foreign
> /home/suman/sources/gromacs-4.5.7/config/missing: line 52:
> automake-1.10: command not found
> WARNING: `automake-1.10' is missing on your system.  You should only need
> it if
>          you modified `Makefile.am', `acinclude.m4' or `configure.ac'.
>          You might want to install the `Automake' and `Perl' packages.
>          Grab them from any GNU archive site.
> cd . && /bin/bash /home/suman/sources/gromacs-4.5.7/config/missing
> --run autoconf
> configure.ac:509: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call
> detected in body
> ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from...
> ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from...
> ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from...
> configure.ac:509: the top level
> configure.ac:525: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call
> detected in body
> ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from...
> ../../lib/autoconf/general.m4:2590: _AC_COMPILE_IFELSE is expanded from...
> ../../lib/autoconf/general.m4:2606: AC_COMPILE_IFELSE is expanded from...
> configure.ac:525: the top level
> configure.ac:17: error: possibly undefined macro: AM_INIT_AUTOMAKE
>       If this token and others are legitimate, please use m4_pattern_allow.
>       See the Autoconf documentation.
> configure.ac:20: error: possibly undefined macro: AM_CONFIG_HEADER
> configure.ac:26: error: possibly undefined macro: AC_ENABLE_SHARED
> configure.ac:27: error: possibly undefined macro: AC_DISABLE_SHARED
> configure.ac:49: error: possibly undefined macro: AM_CONDITIONAL
> configure.ac:372: error: possibly undefined macro: AM_PROG_AS
> configure.ac:609: error: possibly undefined macro: AC_LIBTOOL_WIN32_DLL
> configure.ac:610: error: possibly undefined macro: AC_LIBTOOL_DLOPEN
> configure.ac:611: error: possibly undefined macro: AC_PROG_LIBTOOL
> configure.ac:826: error: possibly undefined macro: AM_WITH_DMALLOC
> make: *** [configure] Error 1
>
> Best regards,
> Suman.
> --
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