[gmx-users] SMD : pulling both primes of DNA

[raghav singh]

Hello All,

My simulation system is composed of DNA and want to pull both of the primes
at the same time towards each other.
I have tried every possible set of parameters in pull code...and i am not
able to pull them together.

it's like ...
the DNA molecule is aligned along Y-axis and if want to pull both ends at
the same time that means pulling in -Y and +Y direction at the same time.

if anyone successfully implemented such ...simulations... Please provide me
with some idea about this problem.

Thank you
Raghav