[gmx-users] distance of pull group 1 is larger than the box size

Justin Lemkul jalemkul at vt.edu
Fri May 3 12:09:54 CEST 2013

On 5/3/13 12:10 AM, Arunima Shilpi wrote:
> Hello sir
> I got the following error while running pulling
> mdrun -s pull.tpr
> "distance of pull group 1 is larger than the box size"
> I request you to kindly guide me in overcoming the error

Since we know nothing of what you are doing or how you are doing it, there's 
very little advice anyone can give.  Your pull settings are inconsistent with 
your configuration, or the system has blown up, causing pull_group1 to go flying 
out of the box.  Please provide more detail, and in particular consult 



Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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