[gmx-users] regression tests 4.6.1 with intel 13.0.1
José Luis Gordillo Ruiz
jlgr at super.unam.mx
Fri May 3 19:52:27 CEST 2013
Hi,
I just built gromacs 4.6.1 with intel compilers 13.0.1 on a machine with Intel E5 2600 CPUs
After run the regression tests in single precision, I had two failed tests (coulandvdwtogether and vdwalone).
Both of them reported this: "Different warnings in reference.warn and grompp.warn" and the differences are the same
====
??--[ 12:07:35 ]--\> $ diff reference.warn grompp.warn
6,11d5
< With coulomb soft core, the reciprocal space calculation will not
< necessarily cancel. It may be necessary to decrease the reciprocal space
< energy, and increase the cutoff radius to get sufficiently close matches
< to energies with free energy turned off.
<
< WARNING 3 [file grompp.mdp]:
======
In double precision, I had the same failed tests, and one more: simtemp
In simtemp checkpot.out has:
--------
??--[ 12:12:36 ]--\> $ more checkpot.out
comparing energy file reference_d.edr and ener.edr
There are 33 terms in the energy files
There are 6 terms to compare in the energy files
LJ (SR) step 20: 5620.37, step 20: 5609.04
LJ (SR) step 40: 5650.96, step 40: 5628.03
Angle step 60: 8.55224, step 60: 8.65452
LJ (SR) step 60: 5674.57, step 60: 5643.39
Angle step 80: 7.04247, step 80: 6.98253
LJ (SR) step 80: 5697.85, step 80: 5658.71
LJ (SR) step 100: 5789.57, step 100: 5748.48
Coulomb (SR) step 100: -31075.7, step 100: -31043.8
Files read successfully
----
Anny suggestions?
saludos,
José Luis Gordillo Ruiz
Coordinación de Supercómputo
UNAM
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