[gmx-users] Re: A problem with do_dssp command

Justin Lemkul jalemkul at vt.edu
Wed May 8 21:04:51 CEST 2013

On 5/8/13 3:03 PM, zugunder wrote:
> Sorry guys, just figured it out:
> correct syntax is g_do_dssp :-)
> Maybe, it would worth correcting the online manual for GROMACS (which is for
> 4.6.1 version now)? do_dssp and editconf are mentioned there without "g_"
> prefix, unlike many other commands...

Prefixes like these are not standard in Gromacs nomenclature and are a result of 
the way that pre-packaged distributions were created for different operating 
systems.  I believe the Fedora package is the same way.



Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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