[gmx-users] Initial velocity

Acoot Brett acootbrett at yahoo.com
Mon May 13 07:48:30 CEST 2013

Dear All,

Will you please explain how the initial velocity may affect the MD results? What the initial velocity really means? How the velocity of the atoms in the protein changes in the MD process? What is the reasonable scope of the initial velocity? Any suggestions on how to manually input a defined initial velocity?



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