[gmx-users] file not found

Humayun Arafat hasagar at gmail.com
Thu May 23 23:44:51 CEST 2013


Thanks for the suggestion.
Currently I do cmake inside  a build directory under Gromacs folder.

cmake .. -DGMX_MPI=OFF   -DGMX_GPU=ON  -DGMX_PREFER_STATIC_LIBS=ON
-DCMAKE_INSTALL_PREFIX=/lus/scratch/mmm/gm_82
make
make install

I deleted everything before start.

-- Installing: /lus/scratch/mmm/gm_82/lib/pkgconfig/libgmx.pc
-- Installing: /lus/scratch/mmm/gm_82/lib/libmd.a
-- Installing: /lus/scratch/mmm/gm_82/lib/pkgconfig/libmd.pc
CMake Error at src/kernel/cmake_install.cmake:146 (FILE):
  file INSTALL cannot find
  "/lus/scratch/mmm/gromacs-release-4-6/build/src/kernel/grompp".
Call Stack (most recent call first):
  src/cmake_install.cmake:51 (INCLUDE)
  cmake_install.cmake:51 (INCLUDE)

Please give me some suggestions and let me know if you need all the logs.

thanks
Humayun

On Thu, May 23, 2013 at 3:25 PM, Mark Abraham <mark.j.abraham at gmail.com>wrote:

> I've never seen anything like that. Note that the build directories are
> non-relocatable. I'd encourage a) rm -rf * your build directories and
> trying again, and b) testing the performance of code compiled with Cray's
> compiler with that of gcc (which we expect to do much better).
>
> Mark
>
>
> On Thu, May 23, 2013 at 10:06 PM, Humayun Arafat <hasagar at gmail.com>
> wrote:
>
> > Hi,
> >
> > Gromacs install fails ta the make install command.
> >
> > This is the output.
> > CMake Error at src/kernel/cmake_install.cmake:92 (FILE):
> >   file INSTALL cannot find
> >   "/lus/scratch/mmm/gromacs-release-4-6/build_8.2/src/kernel/grompp".
> > Call Stack (most recent call first):
> >   src/cmake_install.cmake:45 (INCLUDE)
> >   cmake_install.cmake:45 (INCLUDE)
> >
> >
> > I am using Cray compilers.
> > I tried with cmake 2.8.4/8/11
> >
> > Thanks for the help.
> > Humayun
> > --
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