[gmx-users] grommp problem in gromacs 4.6.1
cyberjhon
cyberjhon at hotmail.com
Fri May 24 21:47:19 CEST 2013
Hi guys
I am trying to generate a .tpr file using grommp in gromacs 4.6.1.
Unfortunately I am obtaining a very strange error:
-------------------------------------------------------
Program grompp, VERSION 4.6.1
Source code file: /N/u/ortgrp/Quarry/src/gromacs-4.6.1/src/kernel/toppush.c,
line: 1336
Fatal error:
Atomtype Zn2+ not found
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors
-------------------------------------------------------
The problem is that I do not have Zn2+ in my files. Neither in the .gro or
in the .top
I tried with a previous version 4.5.5 and it worked perfectly.
I am using opls and it does not contain Zn2+, so that is more rare.
I can not attach the .gro and .top files because the are like 300MB each.
Can you tell me something? is this a bug?
Thanks
John Michael
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