[gmx-users] Using many index file in one command line

Kieu Thu Nguyen kieuthu2212 at gmail.com
Tue May 28 05:51:45 CEST 2013


Thank Terry and Justin so much ! I got it :-)


On Tue, May 28, 2013 at 9:20 AM, Justin Lemkul <jalemkul at vt.edu> wrote:

>
>
> On 5/27/13 10:18 PM, Kieu Thu Nguyen wrote:
>
>> Dear users,
>>
>> Is there command for using many different index.ndx files in one command
>> line ? I used -n flag many times and gromacs report error.
>>
>>
> No Gromacs program accepts multiple index files simultaneously.  You must
> specify whatever groups you need in one index file.  The .ndx format is
> just plain text; you can even just concatenate index files with cat.
>
> -Justin
>
> --
> ==============================**==========
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> Justin A. Lemkul, Ph.D.
> Research Scientist
> Department of Biochemistry
> Virginia Tech
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> jalemkul[at]vt.edu | (540) 231-9080
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