[gmx-users] Difference between the electrostatic treatments PME/Cut-offs and Reaction Field

Mark Abraham mark.j.abraham at gmail.com
Thu May 30 10:14:50 CEST 2013


No charges = no problem. You can trivially test this yourself with mdrun
-rerun ;-)  Manual 4.1.4 talks about what RF is doing.

Mark


On Thu, May 30, 2013 at 6:38 AM, Dallas Warren <Dallas.Warren at monash.edu>wrote:

> In a system that has no charges, should we observe a difference between
> simulations using PME/Cut-offs or Reaction Field?
>
> >From my understanding there should not be, since there are no charges
> which treatment you use shouldn't' make a difference.
>
> However, it does and I am trying to work out why.
>
> Any suggestions on the reason?
>
> What is it that Reaction Field is doing, does it influence anything other
> than long range charge interactions?
>
> Catch ya,
>
> Dr. Dallas Warren
> Drug Discovery Biology
> Monash Institute of Pharmaceutical Sciences, Monash University
> 381 Royal Parade, Parkville VIC 3052
> dallas.warren at monash.edu
> +61 3 9903 9304
> ---------------------------------
> When the only tool you own is a hammer, every problem begins to resemble a
> nail.
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> * Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>



More information about the gromacs.org_gmx-users mailing list