[gmx-users] Regarding lipid bilayer

Kukol, Andreas a.kukol at herts.ac.uk
Tue Oct 8 11:58:22 CEST 2013

And apparently you have only 6438 atoms in system_inflated.gro. So that is the source of the error.

>-----Original Message-----
>From: gmx-users-bounces at gromacs.org [mailto:gmx-users-
>bounces at gromacs.org] On Behalf Of hasthi
>Sent: 08 October 2013 05:56
>To: gmx-users at gromacs.org
>Subject: [gmx-users] Regarding lipid bilayer
>Dear All,
>           I am trying to follow lipid bilayer simulation tutorial,I am getting struck at
>energy minimization same step after generating system_inflated.gro file. I get
>the same error,
>Fatal error:
>Invalid line in system_inflated.gro for atom 6439:
>  25.67360  25.77400   6.59650
>I checked my system_inflated.gro and system.gro files too, the number of
>atoms in the second line are 6538 and 17503 respectively.
>I cannot figure out this error. Please help me in fixing this issue.
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