[gmx-users] (no subject)

[suhani nagpal]

Greetings

I have a large protein of 303 residues and one of the lysine is acetylated
in the same.

The forcefield selection according to the options says as follows:

Residue 'ALY' not found in residue topology database
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors

How to work and get a gro file for the pdb.

Thanks