[gmx-users] Position restraint coordinates are missing

[Yujie Wang]

Hi, gromacs users 

   I have some qestions about the tpr files, I want to extract the energy of
subset via 
  
     tpbconv -f all.tpr -n index.ndx -nsteps -1  -o subset.tpr 
     mdrun -rerun subset.trr -s subset.tpr 
  
    where the subset atom was defined in index file. I obtain the following
error: 

      Software inconsistency error: 
     Position restraint coordinates are missing 

    the atom of subset did not be confined. I just confined some other
atoms. 
    what should I do ?  Any suggestion is appreciated. Thank you very much! 


--
View this message in context: http://gromacs.5086.x6.nabble.com/Position-restraint-coordinates-are-missing-tp5015751.html
Sent from the GROMACS Users Forum mailing list archive at Nabble.com.