[gmx-users] Query in protein insertion in membrane
jalemkul at vt.edu
Wed Dec 3 22:50:15 CET 2014
On 12/3/14 7:21 AM, Priya Das wrote:
> Dear All,
> i have inserted protein in infalted lipid bilayer. (512 lipids)
> I need to delete almost 100 lipids.
> So should i reduce the scaling factor or increase the cutoff radius in this
Why is that a problem? Presumably you just have a very large protein.
> perl inflategro.pl system.gro 4 DPPC 14 system_inflated.gro 5 area.dat
Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalemkul at outerbanks.umaryland.edu | (410) 706-7441
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