[gmx-users] 5.0.4 Compilation - SelectionUnitTests Failed

Mike Hanby mhanby at uab.edu
Tue Dec 16 16:14:43 CET 2014


Howdy,

I'm attempting to build Gromacs 5.0.4 using Intel compilers 13.1.1 for one of the users of our HPC fabric and it errors when running test 13 during the "make check"

[----------] Global test environment tear-down
[==========] 139 tests from 8 test cases ran. (462 ms total)
[  PASSED  ] 138 tests.
[  FAILED  ] 1 test, listed below:
[  FAILED  ] SelectionCollectionDataTest.HandlesCharge

 1 FAILED TEST
....

Total Test time (real) = 148.29 sec

The following tests FAILED:
         13 - SelectionUnitTests (Failed)
Errors while running CTest
make[3]: *** [CMakeFiles/run-ctest] Error 8
make[2]: *** [CMakeFiles/run-ctest.dir/all] Error 2
make[1]: *** [CMakeFiles/check.dir/rule] Error 2
make: *** [check] Error 2

I've attached the cmake, make and make check logs.

Any suggestions on what I can do to debug / fix this issue, or is it benign and I can safely move on to installing?

Thanks, Mike


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