[gmx-users] low performance 2 GTX 980+ Intel CPU Core i7-5930K 3.5 GHz (2011-3)

[Carlos Navarro Retamal]

Dear everyone,
I forgot to mention it, but in order to compile gromacs i used the following command:
>  cmake .. -DGMX_BUILD_OWN_FFTW=ON -DCMAKE_INSTALL_PREFIX=/usr/local/gromacs5.03 -DGMX_GPU=ON -DCUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda-6.5


If you need more info please let me know.
Kind regards,
Carlos
--  
Carlos Navarro Retamal
Bioinformatic engineer
Ph.D(c) in Applied Science, Universidad de Talca, Chile
Center of Bioinformatics and Molecular Simulations (CBSM)
Universidad de Talca
2 Norte 685, Casilla 721, Talca - Chile   
Teléfono: 56-71-201 798,  
Fax: 56-71-201 561
Email: carlos.navarro87 at gmail.com or cnavarro at utalca.cl


On Tuesday, December 30, 2014 at 1:55 PM, Carlos Navarro Retamal wrote:

> ~90k atoms  
>  
> --  
> Carlos Navarro Retamal
> Bioinformatic engineer
> Ph.D(c) in Applied Science, Universidad de Talca, Chile
> Center of Bioinformatics and Molecular Simulations (CBSM)
> Universidad de Talca
> 2 Norte 685, Casilla 721, Talca - Chile   
> Teléfono: 56-71-201 798,  
> Fax: 56-71-201 561
> Email: carlos.navarro87 at gmail.com (mailto:carlos.navarro87 at gmail.com) or cnavarro at utalca.cl (mailto:cnavarro at utalca.cl)
>  
>  
> On Tuesday, December 30, 2014 at 1:54 PM, Albert wrote:
>  
> > How large your system it is? The performance seems to be not so good
> >  
> >  
> >  
> > On 12/30/2014 05:50 PM, Carlos Navarro Retamal wrote:
> > > Dear gromacs users,
> > > I add now the log file of the most important test (2 GPU’s-> 1 job and 1GPU-> 1job)
> > >  
> > > Both GPU’s:
> > >  
> > > command:
> > > mdrun -v
> > > file:http://cl.ly/3w1C2k1X2J2W
> > >  
> >  
> >  
> > --  
> > Gromacs Users mailing list
> >  
> > * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!
> >  
> > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >  
> > * For (un)subscribe requests visit
> > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-request at gromacs.org (mailto:gmx-users-request at gromacs.org).
> >  
> >  
> >  
>  
>