[gmx-users] Forcefield conversion script for POPC lipids

Erik Marklund erik.marklund at chem.ox.ac.uk
Thu Feb 6 16:07:04 CET 2014

Hi users,

I've searched the web for tools that convert atom names in pdb files from e.g. gromos nomenclature to amber or stockholm lipid nomenclature, but with no luck. Manually mapping the atom names is obviously error prone, so if anyone know of a script or a smart approach for this, do tell.

Kind regards,

Erik Marklund, PhD
Postdoctoral Research Associate

Department of Chemistry
Physical & Theoretical Chemistry Laboratory
University of Oxford
South Parks Road

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