[gmx-users] question about g_density

[Tsjerk Wassenaar]

Hi,

Check g_density -h to get a listing of the default input/output file names.

Cheers,

Tsjerk
On Feb 11, 2014 5:14 AM, "jhosamelly" <ducut_melsarose at yahoo.com> wrote:

> I'm doing the Martini Bilayer tutorial. Now, I'm trying to compute the
> bilayer thickness so I used the command
>
> make_ndx -f confout.gro -o index.ndx
>
> to make an index for P*
>
> then I used
>
> g_density -f confout.gro -n index.ndx -o martini.xvg
>
> I looked at the graph and it's fine.
>
> but, when I tried doing it without specifying the input file
>
> g_density -n index.ndx -o martini.xvg
>
> it gives me a different graph.
>
> I'm just wondering, what input file does g_density use when you don't
> specify the input file?
>
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