[gmx-users] PBC problem after MD

[ipek]

Dear Kannan,


Thank you for your fast response. The problem is that the ligand is as far
as 16 Ang., which is too far away from the coenzyme for any kind of bonding.
here is the link for downloading my dist.jpeg file.http://we.tl/ACencjievC

Do you think that this is a real PBC problem?

Really looking forward to hearing from you.


Best,

ipek

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