[gmx-users] Long trajectory split

Marcelo Depólo marcelodepolo at gmail.com
Sun Feb 23 17:32:52 CET 2014


Maybe I should explain it better.

I am using "*mpirun -np 24 mdrun -s prt.tpr -e prt.edr -o prt.trr*", pretty
much a standard line. This job in a batch creates the outputs and, after
some (random) time, a back up is done and new files are written, but the
job itself do not finish.


2014-02-23 17:12 GMT+01:00 Justin Lemkul <jalemkul at vt.edu>:

>
>
> On 2/23/14, 11:00 AM, Marcelo Depólo wrote:
>
>> But it is not quite happening simultaneously, Justin.
>>
>> It is producing one after another and, consequently, backing up the files.
>>
>>
> You'll have to provide the exact commands you're issuing.  Likely you're
> leaving the output names to the default, which causes them to be backed up
> rather than overwritten.
>
>
> -Justin
>
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-- 
Marcelo Depólo Polêto
Uppsala Universitet - Sweden
Science without Borders - CAPES
Phone: +46 76 581 67 49


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