[gmx-users] help with "interaction of type atom in the topology database, but an atom of that name was not found in residue" error

[paulxie]

Thanks for the answer! However, when I run the command below:

 grompp -f ions.mdp -c xxx_solv.gro -p xxx_topol.top -o xxx_ion.tpr

It keeps showing the error message:

Fatal error: 
Topology include file "ff_dum.itp" not found 

Is there a possible way I can skip or not include the file 'ff_dum.itp'? 

--
View this message in context: http://gromacs.5086.x6.nabble.com/help-with-interaction-of-type-atom-in-the-topology-database-but-an-atom-of-that-name-was-not-found-ir-tp5013621p5013645.html
Sent from the GROMACS Users Forum mailing list archive at Nabble.com.