[gmx-users] About membrane protein
jalemkul at vt.edu
Tue Jan 14 00:33:53 CET 2014
On 1/13/14, 6:28 PM, paulxie wrote:
>> I am applying the tutorial's procedure to another membrane protein with an
>> extra-cellular domain. I had tried your tutorial system before this and
>> didn't meet this problem. Thanks Justin!
You will have to position the protein differently if it is oriented
asymmetrically with respect the the membrane. The same principles apply, but
box vectors will certainly be different, as will the editconf command.
Justin A. Lemkul, Ph.D.
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalemkul at outerbanks.umaryland.edu | (410) 706-7441
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