[gmx-users] Ion additon

Harshkumar Singh harshsingh2293 at gmail.com
Wed Jul 2 01:12:19 CEST 2014

I have used the genion option to add Mg2+ ion using the OPLS force
field.When I open the .gro file in VMD I really cannot see the ion but the
Mg ion is mentioned in the .gro file.Is this addition correct?

Also how do I plot the xvg files using Gnuplot?

Harshkumar Singh
2nd Year Integrated MSc Chemistry
IIT Bombay.

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