[gmx-users] Gromacs 5.0 download

[Roland Schulz]

On Wed, Jul 2, 2014 at 6:55 PM, Harshkumar Singh <harshsingh2293 at gmail.com>
wrote:

> I ran the md5sum but it does not match with any of the hashes.What should I
> do now?
>

Which file from which server (/which URL) did you download? What md5 did
you get?

Roland


>
>
> On Wed, Jul 2, 2014 at 5:55 PM, Szilárd Páll <pall.szilard at gmail.com>
> wrote:
>
> > On Wed, Jul 2, 2014 at 11:08 PM, Justin Lemkul <jalemkul at vt.edu> wrote:
> > >
> > >
> > > On 7/2/14, 4:36 PM, Szilárd Páll wrote:
> > >>
> > >> The link is correct, something must be broken on your side. Try using
> > e.g.
> > >> wget:
> > >>
> > >> $ wget ftp://ftp.gromacs.org/pub/gromacs/gromacs-5.0.tar.gz && ls -l
> > >> gromacs*.gz
> > >> --2014-07-02 22:34:44--
> > >> ftp://ftp.gromacs.org/pub/gromacs/gromacs-5.0.tar.gz
> > >>             => `gromacs-5.0.tar.gz'
> > >> Resolving ftp.gromacs.org... 130.238.41.205
> > >> Connecting to ftp.gromacs.org|130.238.41.205|:21... connected.
> > >> Logging in as anonymous ... Logged in!
> > >> ==> SYST ... done.    ==> PWD ... done.
> > >> ==> TYPE I ... done.  ==> CWD (1) /pub/gromacs ... done.
> > >> ==> SIZE gromacs-5.0.tar.gz ... 26862408
> > >> ==> PASV ... done.    ==> RETR gromacs-5.0.tar.gz ... done.
> > >> Length: 26862408 (26M) (unauthoritative)
> > >>
> > >>
> > >>
> >
> 100%[====================================================================>]
> > >> 26,862,408  28.6M/s   in 0.9s
> > >>
> > >
> > > I'm having a similar problem as the OP.  The web interface just seems
> to
> > > hang and using wget takes over an hour with a download rate of < 4
> > KB/sec.
> > > This is true at work (hardwired workstation) and at home (laptop on
> wifi)
> >
> > OK, that's alarming. Perhaps uu.se (which hosts ftp.gromacs.org) got
> > hit hard by the downloads and they throttle (some) connections. Note
> > mine, though, as you can see I got a 28.6 M/s average download speed
> > (but that's of course an unfair comparison).
> >
> > Not sure how to check whether the downloads are really being
> > throttled, but perhaps we should use an alternative host or torrent.
> >
> > > -Justin
> > >
> > >
> > >> 2014-07-02 22:34:45 (28.6 MB/s) - `gromacs-5.0.tar.gz' saved
> [26862408]
> > >>
> > >> Cheers,
> > >> --
> > >> Szilárd
> > >>
> > >>
> > >> On Wed, Jul 2, 2014 at 8:48 PM, Harshkumar Singh
> > >> <harshsingh2293 at gmail.com> wrote:
> > >>>
> > >>> I know this is a silly question but in the downloads section when I
> > click
> > >>> to download it the new window opens and 0bit tar file is downloaded.I
> > >>> switched to windows but even then the new tab doesn't show anything.I
> > >>> don't
> > >>> understand why is this happening.
> > >>> --
> > >>> Gromacs Users mailing list
> > >>>
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> > posting!
> > >>>
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> > >
> > >
> > > --
> > > ==================================================
> > >
> > > Justin A. Lemkul, Ph.D.
> > > Ruth L. Kirschstein NRSA Postdoctoral Fellow
> > >
> > > Department of Pharmaceutical Sciences
> > > School of Pharmacy
> > > Health Sciences Facility II, Room 601
> > > University of Maryland, Baltimore
> > > 20 Penn St.
> > > Baltimore, MD 21201
> > >
> > > jalemkul at outerbanks.umaryland.edu | (410) 706-7441
> > > http://mackerell.umaryland.edu/~jalemkul
> > >
> > > ==================================================
> > >
> > > --
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>
>
>
> --
> Harshkumar Singh
> 2nd Year Integrated MSc Chemistry
> IIT Bombay.
> --
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