[gmx-users] strange but true : How to explain and avoid?

Justin Lemkul jalemkul at vt.edu
Tue Jul 8 02:09:24 CEST 2014

On 7/7/14, 6:28 PM, Chetan Mahajan wrote:
> Dear All,
> I recently made a molecular dynamics run of TiO2-water-sodium-formate
> system of 12740 atoms. Then I extracted dump file from xtc file of
> production run ( NPT, 300 K, 1 bar) using gmxdump command. THere are total
> 10001 frames. Now, I have found that some quote ( not error/warning) is
> getting printed in the middle of the listed coordinates of last frame (end
> of NPT run) in dump file, following quote gets printed:
>             x[ 3129]={ 1.14500e+00,  3.43700e+00,  1.79100e+00}
>             x[ 3130]={ 1.06200e+00,  3.30200e+00,  1.82800e+00}
> gcq#252: "This is Tense !" (Star Wars Episode I The Phantom Menace)

gcq = Gromacs Cool Quotes, witty little quips that are intended to augment your 
enjoyment of using Gromacs.  If you don't want to see them printed, use -quiet, 
use the GMX_NO_QUOTES environment variables, or disable when configuring with 



Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441


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